| Pl. | Team | Sp. | ss-u-n | U | N | Tore | Diff. | Punkte | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 |
 |
Union 1. FC Union Berlin | 31 | 19-10-2 19 | 10 | 2 | 52:18 | 34 | 67 | |
| 2 |
 |
Paderborn (A) SC Paderborn 07 (A) | 31 | 17-7-7 17 | 7 | 7 | 53:29 | 24 | 58 | |
| 3 |
 |
Düsseldorf Fortuna Düsseldorf | 31 | 16-7-8 16 | 7 | 8 | 44:26 | 18 | 55 | |
| 4 |
 |
Unterhaching SpVgg Unterhaching | 31 | 16-6-9 16 | 6 | 9 | 47:39 | 8 | 54 | |
| 5 |
 |
Emden Kickers Emden | 31 | 13-9-9 13 | 9 | 9 | 38:33 | 5 | 48 | |
| 6 |
 |
Bayern II Bayern München II | 31 | 11-14-6 11 | 14 | 6 | 39:29 | 10 | 47 | |
| 7 |
 |
Offenbach (A) Kickers Offenbach (A) | 31 | 12-11-8 12 | 11 | 8 | 37:28 | 9 | 47 | |
| 8 |
 |
Erfurt Rot-Weiß Erfurt | 31 | 13-7-11 13 | 7 | 11 | 40:36 | 4 | 46 | |
| 9 |
 |
Sandhausen SV Sandhausen | 31 | 11-9-11 11 | 9 | 11 | 47:43 | 4 | 42 | |
| 10 |
 |
VfB II VfB Stuttgart II | 31 | 11-8-12 11 | 8 | 12 | 49:40 | 9 | 41 | |
| 11 |
 |
Aue (A) Erzgebirge Aue (A) | 31 | 10-10-11 10 | 10 | 11 | 36:35 | 1 | 40 | |
| 12 |
 |
Braunschweig Eintracht Braunschweig | 31 | 11-6-14 11 | 6 | 14 | 34:35 | -1 | 39 | |
| 13 |
 |
Dresden Dynamo Dresden | 31 | 10-9-12 10 | 9 | 12 | 36:38 | -2 | 39 | |
| 14 |
 |
Regensburg Jahn Regensburg | 31 | 8-11-12 8 | 11 | 12 | 28:42 | -14 | 35 | |
| 15 |
 |
Wuppertal Wuppertaler SV Bor. | 31 | 8-9-14 8 | 9 | 14 | 30:40 | -10 | 33 | |
| 16 |
 |
Jena (A) Carl Zeiss Jena (A) | 31 | 8-9-14 8 | 9 | 14 | 30:47 | -17 | 33 | |
| 17 |
 |
Aalen VfR Aalen | 31 | 6-14-11 6 | 14 | 11 | 25:46 | -21 | 32 | |
| 18 |
 |
Bremen II Werder Bremen II | 31 | 7-8-16 7 | 8 | 16 | 38:50 | -12 | 29 | |
| 19 |
 |
Burghausen Wacker Burghausen | 31 | 7-8-16 7 | 8 | 16 | 30:52 | -22 | 29 | |
| 20 |
 |
Stg. Kickers * Stuttgarter Kickers * | 31 | 5-10-16 5 | 10 | 16 | 32:59 | -27 | 25 |